Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NPHS1O60500 SMPD5-203ENST00000639008 1464 ntBASIC23.05■■□□□ 1.28
NPHS1O60500 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NPHS1O60500 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.05■■□□□ 1.28
NPHS1O60500 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPHS1O60500 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NPHS1O60500 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NPHS1O60500 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.04■■□□□ 1.28
NPHS1O60500 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.04■■□□□ 1.28
NPHS1O60500 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPHS1O60500 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.04■■□□□ 1.28
NPHS1O60500 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPHS1O60500 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
NPHS1O60500 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NPHS1O60500 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NPHS1O60500 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.03■■□□□ 1.28
NPHS1O60500 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.03■■□□□ 1.28
NPHS1O60500 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPHS1O60500 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.02■■□□□ 1.28
NPHS1O60500 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPHS1O60500 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPHS1O60500 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.02■■□□□ 1.28
NPHS1O60500 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.02■■□□□ 1.28
NPHS1O60500 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.01■■□□□ 1.27
NPHS1O60500 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.01■■□□□ 1.27
NPHS1O60500 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 AC092296.2-201ENST00000589470 999 ntBASIC23.01■■□□□ 1.27
NPHS1O60500 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NPHS1O60500 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.01■■□□□ 1.27
NPHS1O60500 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPHS1O60500 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NPHS1O60500 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NPHS1O60500 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23■■□□□ 1.27
NPHS1O60500 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHS1O60500 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHS1O60500 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPHS1O60500 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NPHS1O60500 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHS1O60500 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.98■■□□□ 1.27
NPHS1O60500 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHS1O60500 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
NPHS1O60500 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHS1O60500 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.97■■□□□ 1.27
NPHS1O60500 AC004812.2-201ENST00000611079 2094 ntBASIC22.97■■□□□ 1.27
NPHS1O60500 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHS1O60500 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPHS1O60500 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
NPHS1O60500 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPHS1O60500 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
NPHS1O60500 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPHS1O60500 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.96■■□□□ 1.27
NPHS1O60500 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
NPHS1O60500 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPHS1O60500 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NPHS1O60500 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NPHS1O60500 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPHS1O60500 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
NPHS1O60500 RP9P-202ENST00000450133 1212 ntBASIC22.94■■□□□ 1.26
NPHS1O60500 ECEL1P2-201ENST00000461596 1295 ntBASIC22.94■■□□□ 1.26
NPHS1O60500 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.94■■□□□ 1.26
NPHS1O60500 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.94■■□□□ 1.26
NPHS1O60500 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPHS1O60500 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.93■■□□□ 1.26
NPHS1O60500 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NPHS1O60500 AC012676.1-201ENST00000574705 1949 ntBASIC22.93■■□□□ 1.26
NPHS1O60500 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.93■■□□□ 1.26
NPHS1O60500 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPHS1O60500 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPHS1O60500 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NPHS1O60500 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms