Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA12O60330 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA12O60330 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGA12O60330 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA12O60330 MIR638-201ENST00000385237 100 ntBASIC23.42■■□□□ 1.34
PCDHGA12O60330 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHGA12O60330 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGA12O60330 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGA12O60330 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA12O60330 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA12O60330 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PCDHGA12O60330 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHGA12O60330 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA12O60330 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHGA12O60330 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA12O60330 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA12O60330 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA12O60330 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGA12O60330 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA12O60330 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHGA12O60330 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGA12O60330 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDHGA12O60330 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
PCDHGA12O60330 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHGA12O60330 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA12O60330 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHGA12O60330 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA12O60330 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.39■■□□□ 1.33
PCDHGA12O60330 AL139246.5-201ENST00000606645 996 ntBASIC23.39■■□□□ 1.33
PCDHGA12O60330 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA12O60330 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHGA12O60330 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA12O60330 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA12O60330 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA12O60330 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA12O60330 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHGA12O60330 AC142472.1-201ENST00000612013 1741 ntBASIC23.38■■□□□ 1.33
PCDHGA12O60330 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA12O60330 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA12O60330 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA12O60330 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA12O60330 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGA12O60330 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHGA12O60330 MIR4281-201ENST00000580852 62 ntBASIC23.37■■□□□ 1.33
PCDHGA12O60330 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.37■■□□□ 1.33
PCDHGA12O60330 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA12O60330 AC131281.2-201ENST00000520478 145 ntBASIC23.36■■□□□ 1.33
PCDHGA12O60330 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA12O60330 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA12O60330 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA12O60330 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHGA12O60330 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGA12O60330 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA12O60330 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDHGA12O60330 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGA12O60330 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA12O60330 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGA12O60330 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA12O60330 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA12O60330 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGA12O60330 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGA12O60330 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.34■■□□□ 1.33
PCDHGA12O60330 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA12O60330 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA12O60330 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA12O60330 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA12O60330 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA12O60330 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA12O60330 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA12O60330 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA12O60330 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGA12O60330 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA12O60330 AC010997.5-201ENST00000609182 354 ntBASIC23.32■■□□□ 1.32
PCDHGA12O60330 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA12O60330 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA12O60330 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGA12O60330 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA12O60330 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA12O60330 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA12O60330 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA12O60330 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA12O60330 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA12O60330 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGA12O60330 AC011551.1-201ENST00000614101 683 ntBASIC23.31■■□□□ 1.32
PCDHGA12O60330 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHGA12O60330 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.3■■□□□ 1.32
PCDHGA12O60330 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA12O60330 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA12O60330 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA12O60330 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHGA12O60330 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA12O60330 MIR3621-201ENST00000580529 85 ntBASIC23.3■■□□□ 1.32
PCDHGA12O60330 AL117332.1-201ENST00000622628 974 ntBASIC23.3■■□□□ 1.32
PCDHGA12O60330 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA12O60330 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms