Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.18■■□□□ 1.3
CDX4O14627 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CDX4O14627 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CDX4O14627 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.17■■□□□ 1.3
CDX4O14627 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDX4O14627 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDX4O14627 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.17■■□□□ 1.3
CDX4O14627 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDX4O14627 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDX4O14627 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.17■■□□□ 1.3
CDX4O14627 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDX4O14627 ABCB10P1-201ENST00000614297 2181 ntBASIC23.17■■□□□ 1.3
CDX4O14627 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDX4O14627 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDX4O14627 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDX4O14627 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.16■■□□□ 1.3
CDX4O14627 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CDX4O14627 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDX4O14627 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.15■■□□□ 1.3
CDX4O14627 EDA-201ENST00000338901 1233 ntBASIC23.15■■□□□ 1.3
CDX4O14627 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDX4O14627 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.15■■□□□ 1.3
CDX4O14627 AC142472.1-201ENST00000612013 1741 ntBASIC23.15■■□□□ 1.3
CDX4O14627 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CDX4O14627 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDX4O14627 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDX4O14627 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
CDX4O14627 AL355001.2-201ENST00000620617 1191 ntBASIC23.14■■□□□ 1.29
CDX4O14627 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDX4O14627 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CDX4O14627 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CDX4O14627 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDX4O14627 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDX4O14627 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDX4O14627 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDX4O14627 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.13■■□□□ 1.29
CDX4O14627 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDX4O14627 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDX4O14627 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDX4O14627 AC024257.2-201ENST00000549699 147 ntBASIC23.12■■□□□ 1.29
CDX4O14627 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.12■■□□□ 1.29
CDX4O14627 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CDX4O14627 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDX4O14627 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDX4O14627 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDX4O14627 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDX4O14627 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDX4O14627 LINC01003-201ENST00000564834 1764 ntBASIC23.1■■□□□ 1.29
CDX4O14627 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDX4O14627 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDX4O14627 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CDX4O14627 AC105265.2-201ENST00000467189 838 ntBASIC23.1■■□□□ 1.29
CDX4O14627 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.1■■□□□ 1.29
CDX4O14627 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.1■■□□□ 1.29
CDX4O14627 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDX4O14627 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDX4O14627 DRD5P2-201ENST00000421395 2012 ntBASIC23.09■■□□□ 1.29
CDX4O14627 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CDX4O14627 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CDX4O14627 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.09■■□□□ 1.29
CDX4O14627 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.09■■□□□ 1.29
CDX4O14627 MIR6722-201ENST00000617286 78 ntBASIC23.09■■□□□ 1.29
CDX4O14627 AL136967.2-201ENST00000623968 743 ntBASIC23.09■■□□□ 1.29
CDX4O14627 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.09■■□□□ 1.29
CDX4O14627 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDX4O14627 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDX4O14627 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDX4O14627 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDX4O14627 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.08■■□□□ 1.29
CDX4O14627 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.08■■□□□ 1.29
CDX4O14627 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.08■■□□□ 1.29
CDX4O14627 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.08■■□□□ 1.29
CDX4O14627 SNX5-217ENST00000606557 1087 ntBASIC23.08■■□□□ 1.29
CDX4O14627 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.08■■□□□ 1.29
CDX4O14627 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDX4O14627 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CDX4O14627 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CDX4O14627 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDX4O14627 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDX4O14627 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
CDX4O14627 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.07■■□□□ 1.28
CDX4O14627 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDX4O14627 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDX4O14627 MIR6821-201ENST00000617625 74 ntBASIC23.06■■□□□ 1.28
CDX4O14627 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDX4O14627 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDX4O14627 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDX4O14627 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDX4O14627 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDX4O14627 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDX4O14627 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.05■■□□□ 1.28
CDX4O14627 SRD5A1P1-201ENST00000442297 786 ntBASIC23.05■■□□□ 1.28
CDX4O14627 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDX4O14627 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.05■■□□□ 1.28
CDX4O14627 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.04■■□□□ 1.28
CDX4O14627 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDX4O14627 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.04■■□□□ 1.28
CDX4O14627 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDX4O14627 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CDX4O14627 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms