Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00473A8K010 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LINC00473A8K010 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LINC00473A8K010 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC00473A8K010 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00473A8K010 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00473A8K010 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC00473A8K010 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00473A8K010 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.22■□□□□ 0.67
LINC00473A8K010 MIR4449-201ENST00000578365 66 ntBASIC19.22■□□□□ 0.67
LINC00473A8K010 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
LINC00473A8K010 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.22■□□□□ 0.67
LINC00473A8K010 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00473A8K010 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00473A8K010 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00473A8K010 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LINC00473A8K010 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00473A8K010 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC00473A8K010 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LINC00473A8K010 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00473A8K010 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC00473A8K010 GPX1-201ENST00000419349 1106 ntBASIC19.2■□□□□ 0.66
LINC00473A8K010 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LINC00473A8K010 RAP2CP1-202ENST00000605179 643 ntBASIC19.2■□□□□ 0.66
LINC00473A8K010 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00473A8K010 LINC00543-201ENST00000567234 1845 ntBASIC19.2■□□□□ 0.66
LINC00473A8K010 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00473A8K010 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00473A8K010 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00473A8K010 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00473A8K010 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00473A8K010 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC00473A8K010 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC00473A8K010 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00473A8K010 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00473A8K010 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00473A8K010 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00473A8K010 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00473A8K010 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.18■□□□□ 0.66
LINC00473A8K010 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00473A8K010 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00473A8K010 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LINC00473A8K010 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00473A8K010 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC00473A8K010 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00473A8K010 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00473A8K010 MIR6089-201ENST00000616698 64 ntBASIC19.17■□□□□ 0.66
LINC00473A8K010 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00473A8K010 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00473A8K010 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00473A8K010 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00473A8K010 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00473A8K010 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 AC026202.3-201ENST00000600805 1127 ntBASIC19.16■□□□□ 0.66
LINC00473A8K010 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00473A8K010 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00473A8K010 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LINC00473A8K010 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LINC00473A8K010 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00473A8K010 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00473A8K010 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00473A8K010 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00473A8K010 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LINC00473A8K010 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC00473A8K010 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC00473A8K010 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00473A8K010 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LINC00473A8K010 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00473A8K010 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00473A8K010 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00473A8K010 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LINC00473A8K010 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00473A8K010 AC141586.4-201ENST00000624558 1573 ntBASIC19.12■□□□□ 0.65
LINC00473A8K010 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00473A8K010 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00473A8K010 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms