Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV11-1A0A0K0K1C0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.93■■□□□ 1.1
TRBV11-1A0A0K0K1C0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TRBV11-1A0A0K0K1C0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.93■■□□□ 1.1
TRBV11-1A0A0K0K1C0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 AC120024.1-201ENST00000562672 995 ntBASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRBV11-1A0A0K0K1C0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRBV11-1A0A0K0K1C0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
TRBV11-1A0A0K0K1C0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
TRBV11-1A0A0K0K1C0 KRT18P24-201ENST00000344739 1156 ntBASIC21.9■■□□□ 1.1
TRBV11-1A0A0K0K1C0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.9■■□□□ 1.1
TRBV11-1A0A0K0K1C0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRBV11-1A0A0K0K1C0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRBV11-1A0A0K0K1C0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRBV11-1A0A0K0K1C0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRBV11-1A0A0K0K1C0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRBV11-1A0A0K0K1C0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.86■■□□□ 1.09
TRBV11-1A0A0K0K1C0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRBV11-1A0A0K0K1C0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.85■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 AC011551.1-201ENST00000614101 683 ntBASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV11-1A0A0K0K1C0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV11-1A0A0K0K1C0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRBV11-1A0A0K0K1C0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRBV11-1A0A0K0K1C0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV11-1A0A0K0K1C0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TRBV11-1A0A0K0K1C0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.82■■□□□ 1.08
TRBV11-1A0A0K0K1C0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
TRBV11-1A0A0K0K1C0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 MIR4281-201ENST00000580852 62 ntBASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.81■■□□□ 1.08
TRBV11-1A0A0K0K1C0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 BX664725.1-201ENST00000438252 379 ntBASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 AC239859.2-201ENST00000444165 318 ntBASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV11-1A0A0K0K1C0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV11-1A0A0K0K1C0 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms