Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AL022342.1-201ENST00000400363 863 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 POU5F1P6-201ENST00000466990 990 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AC068137.2-201ENST00000605408 478 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 AL662844.4-201ENST00000606367 2838 ntBASIC12.29□□□□□ -0.44
HLA-DRB4X5D2U9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 TCAF2P1-201ENST00000291129 2421 ntBASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 KRT18P58-201ENST00000527480 1120 ntBASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
HLA-DRB4X5D2U9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-DRB4X5D2U9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms