Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 AL691432.3-201ENST00000621860 400 ntBASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AL031284.1-201ENST00000419297 478 ntBASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AC245100.5-201ENST00000452108 331 ntBASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 KRT18P34-201ENST00000488218 1270 ntBASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AC096734.2-201ENST00000562054 433 ntBASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 AC007064.4-201ENST00000637740 555 ntBASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD1Q9NXG2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 UNC93B6-202ENST00000528242 690 ntBASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AP002469.2-201ENST00000531724 424 ntBASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms