Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 FAM220BP-201ENST00000377689 816 ntBASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AC006518.1-201ENST00000541449 943 ntBASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AL512356.2-201ENST00000546955 174 ntBASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AC026150.2-201ENST00000564693 1156 ntBASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PCDH8P1-201ENST00000428983 2773 ntBASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRDM9Q9NQV7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 PMS2P2-201ENST00000425039 1128 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SPDYE14P-201ENST00000442619 822 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 AC109322.1-201ENST00000524499 1264 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 RARRES2P9-201ENST00000565168 469 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 AP3S2-216ENST00000617003 1561 ntBASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRDM9Q9NQV7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 DOC2GP-204ENST00000639052 2548 ntBASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 SPDYE7P-202ENST00000420373 878 ntBASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.35■□□□□ 0.05
PRDM9Q9NQV7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms