Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 NIT1-215ENST00000496768 790 ntTSL 310.99□□□□□ -0.651e-7■□□□□ 8.5
CSTF2TQ9H0L4 NIT1-207ENST00000477684 499 ntTSL 38.82□□□□□ -11e-7■□□□□ 8.5
CSTF2TQ9H0L4 NIT1-206ENST00000473918 223 ntTSL 36.83□□□□□ -1.321e-7■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-243ENST00000434444 766 ntTSL 316.4■□□□□ 0.222e-10■□□□□ 8.5
CSTF2TQ9H0L4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.051e-28■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-251ENST00000452994 880 ntTSL 314.55□□□□□ -0.082e-10■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-254ENST00000456286 807 ntTSL 1 (best)12.34□□□□□ -0.432e-10■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-253ENST00000454165 544 ntTSL 311.69□□□□□ -0.542e-10■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-242ENST00000433828 902 ntTSL 210.62□□□□□ -0.712e-10■□□□□ 8.5
CSTF2TQ9H0L4 BAG6-241ENST00000428326 1051 ntTSL 510.58□□□□□ -0.722e-10■□□□□ 8.5
CSTF2TQ9H0L4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.197e-7■□□□□ 8.4
CSTF2TQ9H0L4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.17□□□□□ -0.147e-7■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-204ENST00000456665 577 ntTSL 522.53■■□□□ 1.28e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-210ENST00000544213 687 ntTSL 522.53■■□□□ 1.28e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-207ENST00000571804 781 ntTSL 521.71■■□□□ 1.078e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-215ENST00000576106 555 ntTSL 421.44■■□□□ 1.028e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-203ENST00000570403 521 ntTSL 421.25■□□□□ 0.998e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.84■□□□□ 0.938e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-207ENST00000538037 631 ntTSL 520.53■□□□□ 0.888e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-211ENST00000544662 836 ntTSL 320.44■□□□□ 0.868e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-205ENST00000571011 480 ntTSL 520.08■□□□□ 0.818e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.718e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-211ENST00000574941 558 ntTSL 418.3■□□□□ 0.528e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-201ENST00000322060 1206 ntAPPRIS ALT2 TSL 517.65■□□□□ 0.428e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.63■□□□□ 0.098e-8■□□□□ 8.4
CSTF2TQ9H0L4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.218e-8■□□□□ 8.4
CSTF2TQ9H0L4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.58e-8■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-206ENST00000460411 1393 ntTSL 220.07■□□□□ 0.83e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.413e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -03e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.183e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.653e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.883e-7■□□□□ 8.4
CSTF2TQ9H0L4 SEPT6-207ENST00000467310 1061 ntTSL 38.84□□□□□ -0.993e-7■□□□□ 8.4
CSTF2TQ9H0L4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.424e-8■□□□□ 8.4
CSTF2TQ9H0L4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.224e-8■□□□□ 8.4
CSTF2TQ9H0L4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.324e-8■□□□□ 8.4
CSTF2TQ9H0L4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.744e-8■□□□□ 8.4
CSTF2TQ9H0L4 AL365181.3-201ENST00000605886 3222 ntBASIC12.77□□□□□ -0.364e-6■□□□□ 8.4
CSTF2TQ9H0L4 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.08□□□□□ -0.322e-7■□□□□ 8.4
CSTF2TQ9H0L4 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.342e-7■□□□□ 8.4
CSTF2TQ9H0L4 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.7□□□□□ -0.382e-7■□□□□ 8.4
CSTF2TQ9H0L4 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -17e-13■□□□□ 8.4
CSTF2TQ9H0L4 NBAS-204ENST00000427792 442 ntTSL 24.7□□□□□ -1.667e-13■□□□□ 8.4
CSTF2TQ9H0L4 SCARB1-209ENST00000545305 851 ntTSL 212.51□□□□□ -0.415e-8■□□□□ 8.4
CSTF2TQ9H0L4 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.633e-9■□□□□ 8.4
CSTF2TQ9H0L4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-15■□□□□ 8.4
CSTF2TQ9H0L4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.511e-7■□□□□ 8.4
CSTF2TQ9H0L4 RAB4A-203ENST00000481981 531 ntTSL 220.99■□□□□ 0.955e-9■□□□□ 8.4
CSTF2TQ9H0L4 DIP2B-204ENST00000549620 2676 ntTSL 1 (best)17.83■□□□□ 0.441e-7■□□□□ 8.4
CSTF2TQ9H0L4 SAMD10-203ENST00000478694 801 ntTSL 217.77■□□□□ 0.442e-7■□□□□ 8.4
CSTF2TQ9H0L4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.62■□□□□ 0.415e-9■□□□□ 8.4
CSTF2TQ9H0L4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.01■□□□□ 0.315e-9■□□□□ 8.4
CSTF2TQ9H0L4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.35e-9■□□□□ 8.4
CSTF2TQ9H0L4 RAB4A-202ENST00000473894 708 ntTSL 316.26■□□□□ 0.195e-9■□□□□ 8.4
CSTF2TQ9H0L4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.191e-7■□□□□ 8.4
CSTF2TQ9H0L4 GATAD2B-202ENST00000634401 867 ntTSL 515.47■□□□□ 0.071e-7■□□□□ 8.4
CSTF2TQ9H0L4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -01e-11■□□□□ 8.4
CSTF2TQ9H0L4 SAMD10-204ENST00000498830 823 ntTSL 213.82□□□□□ -0.22e-7■□□□□ 8.4
CSTF2TQ9H0L4 GATAD2B-210ENST00000637331 145 ntTSL 513.03□□□□□ -0.321e-7■□□□□ 8.4
CSTF2TQ9H0L4 PRPF19-202ENST00000535326 779 ntTSL 511.48□□□□□ -0.571e-7■□□□□ 8.4
CSTF2TQ9H0L4 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.641e-7■□□□□ 8.4
CSTF2TQ9H0L4 CTIF-204ENST00000587769 547 ntTSL 49.97□□□□□ -0.811e-7■□□□□ 8.4
CSTF2TQ9H0L4 GATAD2B-207ENST00000634791 642 ntTSL 37.93□□□□□ -1.141e-7■□□□□ 8.4
CSTF2TQ9H0L4 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.66□□□□□ -1.181e-7■□□□□ 8.4
CSTF2TQ9H0L4 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.271e-7■□□□□ 8.4
CSTF2TQ9H0L4 PRPF19-205ENST00000540473 169 ntTSL 56.21□□□□□ -1.421e-7■□□□□ 8.4
CSTF2TQ9H0L4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.18□□□□□ -1.421e-7■□□□□ 8.4
CSTF2TQ9H0L4 NRIP1-204ENST00000411932 720 ntTSL 36.14□□□□□ -1.431e-7■□□□□ 8.4
CSTF2TQ9H0L4 UCKL1-207ENST00000632800 1530 ntTSL 513.06□□□□□ -0.325e-20■□□□□ 8.4
CSTF2TQ9H0L4 UCKL1-204ENST00000430743 888 ntTSL 312.34□□□□□ -0.435e-20■□□□□ 8.4
CSTF2TQ9H0L4 BHLHE40-203ENST00000467610 1366 ntTSL 216.43■□□□□ 0.228e-8■□□□□ 8.3
CSTF2TQ9H0L4 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.618e-8■□□□□ 8.3
CSTF2TQ9H0L4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.213e-10■□□□□ 8.3
CSTF2TQ9H0L4 PLXNB1-203ENST00000449094 3863 ntTSL 211.34□□□□□ -0.593e-10■□□□□ 8.3
CSTF2TQ9H0L4 PLXNB1-212ENST00000473683 284 ntTSL 38.78□□□□□ -13e-10■□□□□ 8.3
CSTF2TQ9H0L4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.024e-6■□□□□ 8.3
CSTF2TQ9H0L4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.154e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.38■□□□□ 0.534e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.524e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-208ENST00000577696 656 ntTSL 418.29■□□□□ 0.524e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.434e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.46■□□□□ 0.394e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-228ENST00000583242 600 ntTSL 417.28■□□□□ 0.364e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-217ENST00000578941 1079 ntTSL 1 (best)16.89■□□□□ 0.294e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-226ENST00000582608 559 ntTSL 416.86■□□□□ 0.294e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.45■□□□□ 0.224e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-229ENST00000583359 896 ntTSL 516.27■□□□□ 0.24e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-222ENST00000582395 565 ntTSL 415.98■□□□□ 0.154e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.91■□□□□ 0.144e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-207ENST00000577471 573 ntTSL 415.75■□□□□ 0.114e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-213ENST00000578064 548 ntTSL 415.68■□□□□ 0.14e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-225ENST00000582545 470 ntTSL 415.63■□□□□ 0.094e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-6■□□□□ 8.3
CSTF2TQ9H0L4 KHSRP-206ENST00000595258 672 ntTSL 515.2■□□□□ 0.024e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-209ENST00000577707 534 ntTSL 415□□□□□ -0.014e-6■□□□□ 8.3
CSTF2TQ9H0L4 KHSRP-207ENST00000595548 801 ntTSL 214.89□□□□□ -0.034e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-212ENST00000577888 617 ntTSL 214.56□□□□□ -0.084e-6■□□□□ 8.3
CSTF2TQ9H0L4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.084e-6■□□□□ 8.3
Retrieved 100 of 19,151 protein–RNA pairs in 284.1 ms