Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ANAPC16-202ENST00000470481 1828 ntTSL 1 (best)8.82□□□□□ -18e-6■■□□□ 12.7
RPS3P23396 LAMB2-214ENST00000488638 343 ntTSL 311.65□□□□□ -0.546e-8■■□□□ 12.7
RPS3P23396 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)12.06□□□□□ -0.481e-9■■□□□ 12.7
RPS3P23396 TFRC-211ENST00000475593 875 ntTSL 35.29□□□□□ -1.562e-7■■□□□ 12.7
RPS3P23396 NEDD9-210ENST00000505589 571 ntTSL 29.35□□□□□ -0.912e-6■■□□□ 12.7
RPS3P23396 SLC4A2-218ENST00000494125 782 ntTSL 223.4■■□□□ 1.349e-7■■□□□ 12.6
RPS3P23396 SLC4A2-213ENST00000483786 571 ntTSL 417.1■□□□□ 0.339e-7■■□□□ 12.6
RPS3P23396 SLC4A2-206ENST00000466368 548 ntTSL 414.64□□□□□ -0.079e-7■■□□□ 12.6
RPS3P23396 MVD-203ENST00000562651 908 ntTSL 219.81■□□□□ 0.764e-9■■□□□ 12.6
RPS3P23396 MVD-213ENST00000566636 863 ntTSL 318.85■□□□□ 0.614e-9■■□□□ 12.6
RPS3P23396 MVD-216ENST00000568709 809 ntTSL 518.15■□□□□ 0.54e-9■■□□□ 12.6
RPS3P23396 CNP-203ENST00000441615 622 ntTSL 316.85■□□□□ 0.296e-11■■□□□ 12.6
RPS3P23396 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.027e-16■■□□□ 12.6
RPS3P23396 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.02■□□□□ -07e-16■■□□□ 12.6
RPS3P23396 COX11-204ENST00000572558 1054 ntTSL 314.45□□□□□ -0.17e-16■■□□□ 12.6
RPS3P23396 COX11-210ENST00000639671 696 ntBASIC14.45□□□□□ -0.17e-16■■□□□ 12.6
RPS3P23396 AUP1-208ENST00000486234 984 ntTSL 512.91□□□□□ -0.342e-8■■□□□ 12.6
RPS3P23396 CNP-208ENST00000589772 516 ntTSL 412.81□□□□□ -0.366e-11■■□□□ 12.6
RPS3P23396 LMNA-224ENST00000515711 569 ntTSL 511.89□□□□□ -0.517e-16■■□□□ 12.6
RPS3P23396 COX11-209ENST00000576370 2663 ntTSL 1 (best)11.12□□□□□ -0.637e-16■■□□□ 12.6
RPS3P23396 AUP1-203ENST00000462297 457 ntTSL 39.71□□□□□ -0.862e-8■■□□□ 12.6
RPS3P23396 CNP-206ENST00000585452 689 ntTSL 29.3□□□□□ -0.926e-11■■□□□ 12.6
RPS3P23396 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.6■□□□□ 0.412e-7■■□□□ 12.6
RPS3P23396 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-7■■□□□ 12.6
RPS3P23396 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.08■□□□□ 0.162e-7■■□□□ 12.6
RPS3P23396 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.07■■□□□ 1.448e-6■■□□□ 12.6
RPS3P23396 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.72■■□□□ 1.398e-6■■□□□ 12.6
RPS3P23396 MCM4-210ENST00000520934 621 ntTSL 323.35■■□□□ 1.338e-6■■□□□ 12.6
RPS3P23396 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.03■■□□□ 1.288e-6■■□□□ 12.6
RPS3P23396 RAD51-204ENST00000525066 1545 ntTSL 522.39■■□□□ 1.178e-6■■□□□ 12.6
RPS3P23396 POLR2E-205ENST00000586817 2441 ntTSL 222.1■■□□□ 1.132e-10■■□□□ 12.6
RPS3P23396 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.74■■□□□ 1.078e-6■■□□□ 12.6
RPS3P23396 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.04■□□□□ 0.962e-10■■□□□ 12.6
RPS3P23396 IPO11-207ENST00000505902 530 ntTSL 419.49■□□□□ 0.718e-6■■□□□ 12.6
RPS3P23396 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.638e-6■■□□□ 12.6
RPS3P23396 KIF2A-207ENST00000509663 759 ntTSL 318.94■□□□□ 0.628e-6■■□□□ 12.6
RPS3P23396 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.68e-6■■□□□ 12.6
RPS3P23396 NDUFB8-208ENST00000531189 577 ntTSL 218.68■□□□□ 0.583e-11■■□□□ 12.6
RPS3P23396 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.65■□□□□ 0.588e-6■■□□□ 12.6
RPS3P23396 KAT5-214ENST00000534104 576 ntTSL 418.56■□□□□ 0.568e-6■■□□□ 12.6
RPS3P23396 C12orf57-203ENST00000538392 979 ntTSL 218.22■□□□□ 0.518e-6■■□□□ 12.6
RPS3P23396 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.75■□□□□ 0.438e-6■■□□□ 12.6
RPS3P23396 TYMS-206ENST00000584122 534 ntTSL 417.72■□□□□ 0.434e-8■■□□□ 12.6
RPS3P23396 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.398e-6■■□□□ 12.6
RPS3P23396 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.82■□□□□ 0.288e-6■■□□□ 12.6
RPS3P23396 AC087163.2-201ENST00000457299 853 ntBASIC16.8■□□□□ 0.288e-6■■□□□ 12.6
RPS3P23396 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.268e-6■■□□□ 12.6
RPS3P23396 POLR2E-201ENST00000215587 1286 ntTSL 316.42■□□□□ 0.222e-10■■□□□ 12.6
RPS3P23396 ANO10-211ENST00000444344 575 ntTSL 316.15■□□□□ 0.188e-6■■□□□ 12.6
RPS3P23396 POLR2E-208ENST00000591709 685 ntTSL 216.05■□□□□ 0.162e-10■■□□□ 12.6
RPS3P23396 TUBB2A-202ENST00000489942 817 ntTSL 216.02■□□□□ 0.168e-6■■□□□ 12.6
RPS3P23396 DHX9-206ENST00000483416 814 ntTSL 516.01■□□□□ 0.158e-6■■□□□ 12.6
RPS3P23396 KAT5-211ENST00000532042 763 ntTSL 215.91■□□□□ 0.148e-6■■□□□ 12.6
RPS3P23396 POLR2E-209ENST00000591767 1214 ntTSL 215.76■□□□□ 0.112e-10■■□□□ 12.6
RPS3P23396 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.118e-6■■□□□ 12.6
RPS3P23396 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.62■□□□□ 0.099e-7■■□□□ 12.6
RPS3P23396 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.068e-6■■□□□ 12.6
RPS3P23396 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.038e-6■■□□□ 12.6
RPS3P23396 ANO10-208ENST00000428831 641 ntTSL 515.19■□□□□ 0.028e-6■■□□□ 12.6
RPS3P23396 PLOD3-216ENST00000489927 562 ntTSL 215.1■□□□□ 0.013e-9■■□□□ 12.6
RPS3P23396 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.018e-6■■□□□ 12.6
RPS3P23396 ARL1-204ENST00000548070 590 ntTSL 414.9□□□□□ -0.028e-6■■□□□ 12.6
RPS3P23396 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.062e-10■■□□□ 12.6
RPS3P23396 FKBP4-206ENST00000543769 425 ntTSL 514.66□□□□□ -0.068e-6■■□□□ 12.6
RPS3P23396 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.082e-10■■□□□ 12.6
RPS3P23396 TMEM101-206ENST00000590905 573 ntTSL 514.51□□□□□ -0.093e-7■■□□□ 12.6
RPS3P23396 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.118e-6■■□□□ 12.6
RPS3P23396 POLR2E-206ENST00000589737 1105 ntTSL 214.36□□□□□ -0.112e-10■■□□□ 12.6
RPS3P23396 POLR2E-210ENST00000592597 440 ntTSL 214.33□□□□□ -0.123e-13■■□□□ 12.6
RPS3P23396 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.9□□□□□ -0.188e-6■■□□□ 12.6
RPS3P23396 ARL1-208ENST00000551092 731 ntTSL 513.74□□□□□ -0.218e-6■■□□□ 12.6
RPS3P23396 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.73□□□□□ -0.218e-6■■□□□ 12.6
RPS3P23396 DRC3-206ENST00000490517 5805 ntTSL 213.72□□□□□ -0.218e-6■■□□□ 12.6
RPS3P23396 ABCE1-202ENST00000502586 786 ntTSL 513.6□□□□□ -0.238e-6■■□□□ 12.6
RPS3P23396 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.31□□□□□ -0.288e-6■■□□□ 12.6
RPS3P23396 KAT5-206ENST00000527544 745 ntTSL 213.25□□□□□ -0.298e-6■■□□□ 12.6
RPS3P23396 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.312e-10■■□□□ 12.6
RPS3P23396 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.328e-6■■□□□ 12.6
RPS3P23396 TMEM101-202ENST00000585950 682 ntTSL 312.93□□□□□ -0.349e-7■■□□□ 12.6
RPS3P23396 HDAC1-203ENST00000463172 895 ntTSL 212.71□□□□□ -0.378e-6■■□□□ 12.6
RPS3P23396 HDAC1-207ENST00000481281 721 ntTSL 512.68□□□□□ -0.388e-6■■□□□ 12.6
RPS3P23396 ANO10-214ENST00000456438 545 ntTSL 412.19□□□□□ -0.468e-6■■□□□ 12.6
RPS3P23396 MCM4-216ENST00000524086 547 ntTSL 512.12□□□□□ -0.478e-6■■□□□ 12.6
RPS3P23396 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.478e-6■■□□□ 12.6
RPS3P23396 DCXR-208ENST00000579004 341 ntTSL 312.05□□□□□ -0.482e-10■■□□□ 12.6
RPS3P23396 SRP54-206ENST00000555317 644 ntTSL 211.8□□□□□ -0.528e-6■■□□□ 12.6
RPS3P23396 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.548e-6■■□□□ 12.6
RPS3P23396 KAT5-215ENST00000534293 559 ntTSL 311.61□□□□□ -0.558e-6■■□□□ 12.6
RPS3P23396 AC011462.1-201ENST00000604424 567 ntTSL 411.56□□□□□ -0.568e-6■■□□□ 12.6
RPS3P23396 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC11.54□□□□□ -0.568e-6■■□□□ 12.6
RPS3P23396 TMEM263-202ENST00000547081 833 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.598e-6■■□□□ 12.6
RPS3P23396 SRP54-203ENST00000553544 491 ntTSL 211.34□□□□□ -0.598e-6■■□□□ 12.6
RPS3P23396 ANAPC7-204ENST00000464697 734 ntTSL 311.27□□□□□ -0.618e-6■■□□□ 12.6
RPS3P23396 ARL1-209ENST00000551671 879 ntTSL 2 BASIC11.19□□□□□ -0.628e-6■■□□□ 12.6
RPS3P23396 MED8-201ENST00000290663 1483 ntTSL 5 BASIC11.19□□□□□ -0.628e-6■■□□□ 12.6
RPS3P23396 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.628e-6■■□□□ 12.6
RPS3P23396 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.638e-6■■□□□ 12.6
RPS3P23396 MCM4-207ENST00000519170 734 ntTSL 311.12□□□□□ -0.638e-6■■□□□ 12.6
RPS3P23396 SRP54-213ENST00000556994 2327 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.648e-6■■□□□ 12.6
RPS3P23396 DCXR-202ENST00000577286 553 ntTSL 211.03□□□□□ -0.642e-10■■□□□ 12.6
Retrieved 100 of 24,271 protein–RNA pairs in 301.1 ms