RNA–Protein interactions for RNA: ENST00000462297.1

AUP1-203, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 3

Gene AUP1, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-203ENST00000462297 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
AUP1-203ENST00000462297 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
AUP1-203ENST00000462297 ABCC9O60706 1549 aa20.67■□□□□ 0.9
AUP1-203ENST00000462297 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
AUP1-203ENST00000462297 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
AUP1-203ENST00000462297 NACADO15069 1562 aa19.92■□□□□ 0.78
AUP1-203ENST00000462297 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
AUP1-203ENST00000462297 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
AUP1-203ENST00000462297 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
AUP1-203ENST00000462297 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
AUP1-203ENST00000462297 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
AUP1-203ENST00000462297 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.692e-7■■■□□ 17.8
AUP1-203ENST00000462297 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
AUP1-203ENST00000462297 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
AUP1-203ENST00000462297 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
AUP1-203ENST00000462297 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
AUP1-203ENST00000462297 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
AUP1-203ENST00000462297 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
AUP1-203ENST00000462297 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
AUP1-203ENST00000462297 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
AUP1-203ENST00000462297 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
AUP1-203ENST00000462297 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
AUP1-203ENST00000462297 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
AUP1-203ENST00000462297 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
AUP1-203ENST00000462297 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
AUP1-203ENST00000462297 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
AUP1-203ENST00000462297 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
AUP1-203ENST00000462297 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
AUP1-203ENST00000462297 WIZO95785 1651 aa18.24■□□□□ 0.51
AUP1-203ENST00000462297 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
AUP1-203ENST00000462297 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
AUP1-203ENST00000462297 NESP48681 1621 aa17.91■□□□□ 0.46
AUP1-203ENST00000462297 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
AUP1-203ENST00000462297 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
AUP1-203ENST00000462297 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
AUP1-203ENST00000462297 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
AUP1-203ENST00000462297 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
AUP1-203ENST00000462297 CFTRP13569 1480 aa17.73■□□□□ 0.43
AUP1-203ENST00000462297 CUX2O14529 1486 aa17.71■□□□□ 0.43
AUP1-203ENST00000462297 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
AUP1-203ENST00000462297 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
AUP1-203ENST00000462297 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
AUP1-203ENST00000462297 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
AUP1-203ENST00000462297 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
AUP1-203ENST00000462297 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
AUP1-203ENST00000462297 WDR62O43379 1518 aa17.55■□□□□ 0.4
AUP1-203ENST00000462297 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
AUP1-203ENST00000462297 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
AUP1-203ENST00000462297 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
AUP1-203ENST00000462297 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.37
AUP1-203ENST00000462297 CUX1P39880 1505 aa17.29■□□□□ 0.36
AUP1-203ENST00000462297 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
AUP1-203ENST00000462297 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
AUP1-203ENST00000462297 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
AUP1-203ENST00000462297 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
AUP1-203ENST00000462297 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
AUP1-203ENST00000462297 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
AUP1-203ENST00000462297 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
AUP1-203ENST00000462297 SOGA1O94964 1423 aa17.15■□□□□ 0.34
AUP1-203ENST00000462297 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
AUP1-203ENST00000462297 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
AUP1-203ENST00000462297 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
AUP1-203ENST00000462297 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
AUP1-203ENST00000462297 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
AUP1-203ENST00000462297 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
AUP1-203ENST00000462297 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
AUP1-203ENST00000462297 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
AUP1-203ENST00000462297 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
AUP1-203ENST00000462297 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
AUP1-203ENST00000462297 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
AUP1-203ENST00000462297 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
AUP1-203ENST00000462297 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
AUP1-203ENST00000462297 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
AUP1-203ENST00000462297 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
AUP1-203ENST00000462297 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
AUP1-203ENST00000462297 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
AUP1-203ENST00000462297 FBLN2P98095 1184 aa16.86■□□□□ 0.29
AUP1-203ENST00000462297 CHD1O14646 1710 aa16.84■□□□□ 0.29
AUP1-203ENST00000462297 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
AUP1-203ENST00000462297 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
AUP1-203ENST00000462297 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
AUP1-203ENST00000462297 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
AUP1-203ENST00000462297 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
AUP1-203ENST00000462297 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
AUP1-203ENST00000462297 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
AUP1-203ENST00000462297 IGF1RP08069 1367 aa16.76■□□□□ 0.27
AUP1-203ENST00000462297 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
AUP1-203ENST00000462297 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
AUP1-203ENST00000462297 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
AUP1-203ENST00000462297 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
AUP1-203ENST00000462297 CUL7Q14999 1698 aa16.67■□□□□ 0.26
AUP1-203ENST00000462297 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
AUP1-203ENST00000462297 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
AUP1-203ENST00000462297 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
AUP1-203ENST00000462297 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
AUP1-203ENST00000462297 NUP160Q12769 1436 aa16.64■□□□□ 0.25
AUP1-203ENST00000462297 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
AUP1-203ENST00000462297 FAM9AQ8IZU1 332 aaPredicted RBP16.62■□□□□ 0.25
AUP1-203ENST00000462297 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
AUP1-203ENST00000462297 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms