Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ERCC2P18074 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.7■□□□□ 0.26
ERCC2P18074 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC2P18074 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 AC008894.3-201ENST00000624324 3103 ntBASIC16.7■□□□□ 0.26
ERCC2P18074 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC2P18074 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ERCC2P18074 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC2P18074 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC2P18074 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC2P18074 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ERCC2P18074 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 AC112504.1-201ENST00000623415 1841 ntBASIC16.69■□□□□ 0.26
ERCC2P18074 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 GPS2P2-201ENST00000430745 888 ntBASIC16.69■□□□□ 0.26
ERCC2P18074 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.69■□□□□ 0.26
ERCC2P18074 DNAJB3-202ENST00000449667 1266 ntBASIC16.69■□□□□ 0.26
ERCC2P18074 RARRES2P9-201ENST00000565168 469 ntBASIC16.69■□□□□ 0.26
ERCC2P18074 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC2P18074 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 AL596442.2-201ENST00000610240 980 ntBASIC16.69■□□□□ 0.26
ERCC2P18074 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC2P18074 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC2P18074 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC2P18074 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC2P18074 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC2P18074 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC2P18074 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC2P18074 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC2P18074 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 RBPMS2P1-201ENST00000437762 623 ntBASIC16.68■□□□□ 0.26
ERCC2P18074 AC023141.5-201ENST00000458585 616 ntBASIC16.68■□□□□ 0.26
ERCC2P18074 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC2P18074 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC2P18074 ALG1L8P-201ENST00000533887 760 ntBASIC16.68■□□□□ 0.26
ERCC2P18074 SNHG9-202ENST00000564014 471 ntBASIC16.68■□□□□ 0.26
ERCC2P18074 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC2P18074 AC009093.7-201ENST00000623853 1223 ntBASIC16.68■□□□□ 0.26
ERCC2P18074 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC2P18074 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC2P18074 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC2P18074 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms