Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
UPK1BO75841 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 AC003669.1-201ENST00000334569 611 ntBASIC14.17□□□□□ -0.14
UPK1BO75841 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.17□□□□□ -0.14
UPK1BO75841 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.17□□□□□ -0.14
UPK1BO75841 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UPK1BO75841 TCAF1P1-201ENST00000414990 2232 ntBASIC14.17□□□□□ -0.14
UPK1BO75841 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UPK1BO75841 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UPK1BO75841 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 AD001527.2-201ENST00000622994 785 ntBASIC14.16□□□□□ -0.14
UPK1BO75841 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1BO75841 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 ST20-AS1-201ENST00000560255 4223 ntBASIC14.16□□□□□ -0.14
UPK1BO75841 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UPK1BO75841 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1BO75841 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms