Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.96□□□□□ -0.49
NACAE9PAV3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SLC25A6P2-201ENST00000497974 877 ntBASIC11.96□□□□□ -0.49
NACAE9PAV3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 AL589182.2-201ENST00000619332 1049 ntBASIC11.96□□□□□ -0.49
NACAE9PAV3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 AC129492.6-201ENST00000611383 1305 ntBASIC11.96□□□□□ -0.49
NACAE9PAV3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
NACAE9PAV3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NACAE9PAV3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.96□□□□□ -0.49
NACAE9PAV3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.96□□□□□ -0.5
NACAE9PAV3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.96□□□□□ -0.5
NACAE9PAV3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.96□□□□□ -0.5
NACAE9PAV3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
NACAE9PAV3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.96□□□□□ -0.5
NACAE9PAV3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
NACAE9PAV3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.96□□□□□ -0.5
NACAE9PAV3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.96□□□□□ -0.5
NACAE9PAV3 RNA5SP416-201ENST00000516838 111 ntBASIC11.96□□□□□ -0.5
NACAE9PAV3 AC010654.1-201ENST00000615722 808 ntBASIC11.96□□□□□ -0.5
NACAE9PAV3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.96□□□□□ -0.5
NACAE9PAV3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
NACAE9PAV3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
NACAE9PAV3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NACAE9PAV3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.95□□□□□ -0.5
NACAE9PAV3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.95□□□□□ -0.5
NACAE9PAV3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
NACAE9PAV3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
NACAE9PAV3 AC024909.3-201ENST00000611513 2257 ntBASIC11.95□□□□□ -0.5
NACAE9PAV3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NACAE9PAV3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NACAE9PAV3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms