Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC02012-201ENST00000608206 1725 ntBASIC18.9■□□□□ 0.62
EFCC1Q9HA90 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EFCC1Q9HA90 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFCC1Q9HA90 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFCC1Q9HA90 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EFCC1Q9HA90 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EFCC1Q9HA90 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.62
EFCC1Q9HA90 AC006277.1-201ENST00000624348 1610 ntBASIC18.89■□□□□ 0.62
EFCC1Q9HA90 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 CROCCP4-201ENST00000457096 498 ntBASIC18.89■□□□□ 0.61
EFCC1Q9HA90 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFCC1Q9HA90 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 LINC00554-201ENST00000564841 3011 ntBASIC18.88■□□□□ 0.61
EFCC1Q9HA90 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 AC008735.3-201ENST00000596646 500 ntBASIC18.88■□□□□ 0.61
EFCC1Q9HA90 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.88■□□□□ 0.61
EFCC1Q9HA90 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFCC1Q9HA90 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 ANKRD19P-201ENST00000338192 862 ntBASIC18.87■□□□□ 0.61
EFCC1Q9HA90 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.87■□□□□ 0.61
EFCC1Q9HA90 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms