Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AL627231.1-201ENST00000394467 1125 ntBASIC4.8□□□□□ -1.64
HMCN1Q96RW7 HNRNPA1P41-201ENST00000397777 928 ntBASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 PHF23-213ENST00000613632 850 ntTSL 5 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 NF1P11-201ENST00000621292 1282 ntBASIC4.8□□□□□ -1.64
HMCN1Q96RW7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMCN1Q96RW7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 NHP2P1-201ENST00000335274 462 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AL121949.3-201ENST00000406684 385 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC007881.1-201ENST00000437460 187 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC083801.1-201ENST00000491689 358 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MIR4683-201ENST00000579659 81 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AL157791.1-201ENST00000553667 1699 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MIR557-201ENST00000385239 98 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC005041.3-201ENST00000606287 649 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AL590440.2-201ENST00000641973 1595 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AFG3L1P-217ENST00000557444 2447 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms