Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 AC234783.1-201ENST00000441761 496 ntBASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 AC008735.3-201ENST00000596646 500 ntBASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 AL033527.5-201ENST00000641382 801 ntBASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.72■□□□□ 0.27
NPAS3Q8IXF0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS3Q8IXF0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.71■□□□□ 0.26
NPAS3Q8IXF0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
NPAS3Q8IXF0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS3Q8IXF0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.71■□□□□ 0.26
NPAS3Q8IXF0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 AC104596.2-201ENST00000512793 793 ntBASIC16.7■□□□□ 0.26
NPAS3Q8IXF0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms