Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 MIR648-201ENST00000385046 94 ntBASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 MED15P5-201ENST00000423150 992 ntBASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST2H3AQ71DI3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC002056.1-201ENST00000395613 760 ntBASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 AC024909.3-201ENST00000611513 2257 ntBASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST2H3AQ71DI3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 AC079328.2-201ENST00000561241 3354 ntBASIC14.33□□□□□ -0.11
HIST2H3AQ71DI3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC073439.1-201ENST00000624121 1774 ntBASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms