Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 BX842568.4-201ENST00000421222 227 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 DNAJB3-201ENST00000446806 729 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 PGAM5P1-201ENST00000518923 814 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC096734.2-201ENST00000562054 433 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 KRT18P13-201ENST00000400056 1290 ntBASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AC087163.2-201ENST00000457299 853 ntBASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AC023511.2-201ENST00000618803 211 ntBASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AC007064.4-201ENST00000637740 555 ntBASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 AL365209.1-201ENST00000624418 6473 ntBASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.49□□□□□ -0.09
PCGF3Q3KNV8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 AP002414.2-201ENST00000591780 3365 ntBASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCGF3Q3KNV8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms