Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.4□□□□□ -0.74
UBE2AP49459 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2AP49459 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2AP49459 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2AP49459 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2AP49459 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
UBE2AP49459 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
UBE2AP49459 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
UBE2AP49459 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
UBE2AP49459 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.4□□□□□ -0.75
UBE2AP49459 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 AC005052.1-201ENST00000625181 2492 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 AKR1C7P-201ENST00000305623 895 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 AC004870.1-201ENST00000315132 882 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
UBE2AP49459 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 RPS15P9-201ENST00000494093 319 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.39□□□□□ -0.75
UBE2AP49459 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 AF238378.1-201ENST00000526806 358 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.39□□□□□ -0.75
UBE2AP49459 AC091167.2-201ENST00000579581 588 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 AC025062.2-201ENST00000605477 670 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
UBE2AP49459 PGM5P2-202ENST00000637225 1043 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
UBE2AP49459 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.39□□□□□ -0.75
UBE2AP49459 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 AC126335.2-201ENST00000623362 4637 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 AC006504.4-201ENST00000592118 1568 ntBASIC10.39□□□□□ -0.75
UBE2AP49459 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2AP49459 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2AP49459 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2AP49459 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2AP49459 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2AP49459 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
UBE2AP49459 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2AP49459 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms