Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AL844908.2-201ENST00000609461 460 ntBASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AL035252.4-201ENST00000624174 288 ntBASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 AC006538.1-201ENST00000567905 1585 ntBASIC15.33■□□□□ 0.05
RAB40ALP0C0E4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 AL080243.2-201ENST00000418783 582 ntBASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 AC061975.2-201ENST00000581722 295 ntBASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 SPDYE22P-201ENST00000582158 798 ntBASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB40ALP0C0E4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 AL031731.1-201ENST00000642131 2094 ntBASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 AC009407.1-201ENST00000568958 598 ntBASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 AL662799.1-202ENST00000614205 422 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms