Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC106028.4-201ENST00000614509 607 ntBASIC15.59■□□□□ 0.09
PCDH17O14917 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH17O14917 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH17O14917 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH17O14917 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH17O14917 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH17O14917 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
PCDH17O14917 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 AC068418.2-201ENST00000577309 3703 ntBASIC15.58■□□□□ 0.09
PCDH17O14917 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PCDH17O14917 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH17O14917 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PCDH17O14917 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH17O14917 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PCDH17O14917 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 MIR770-201ENST00000390219 98 ntBASIC15.58■□□□□ 0.08
PCDH17O14917 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH17O14917 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH17O14917 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH17O14917 AC069335.1-201ENST00000489972 472 ntBASIC15.58■□□□□ 0.08
PCDH17O14917 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH17O14917 AC004449.1-201ENST00000564240 433 ntBASIC15.58■□□□□ 0.08
PCDH17O14917 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH17O14917 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH17O14917 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH17O14917 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH17O14917 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCDH17O14917 AL365203.3-201ENST00000609742 2057 ntBASIC15.58■□□□□ 0.08
PCDH17O14917 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH17O14917 AC006538.1-201ENST00000567905 1585 ntBASIC15.58■□□□□ 0.08
PCDH17O14917 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH17O14917 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 KRT18P32-201ENST00000424695 1287 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 FAM8A3P-201ENST00000427218 844 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 SPCS2P4-201ENST00000436160 681 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDH17O14917 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDH17O14917 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDH17O14917 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 AC092364.2-202ENST00000597012 1073 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 AP001059.3-201ENST00000619053 235 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms