Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC026120.1-201ENST00000611536 926 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC106028.4-201ENST00000614509 607 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL161645.1-201ENST00000622716 1255 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL513210.1-201ENST00000629608 234 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL353732.1-201ENST00000569618 1459 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC063926.3-201ENST00000624734 5658 ntBASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC022145.2-201ENST00000598203 171 ntBASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AP001350.2-201ENST00000625104 1094 ntBASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC105917.1-201ENST00000506637 2539 ntBASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms