Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 REXO1L8P-201ENST00000604378 1897 ntBASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 STRCP1-201ENST00000509801 5328 ntBASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 AC104187.1-201ENST00000607510 612 ntBASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 AL031848.2-201ENST00000607670 837 ntBASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CYP51A1P1-201ENST00000492267 1507 ntBASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC8.37□□□□□ -1.07
LINC01558Q9Y6Z2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 AC114271.1-201ENST00000612689 2813 ntBASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 AC126365.1-201ENST00000578585 1514 ntBASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 HES2-206ENST00000489730 730 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 MAX-217ENST00000557277 728 ntTSL 3 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 AC131212.3-201ENST00000624087 4219 ntBASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LINC01558Q9Y6Z2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms