Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH20Q9HBT6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.3□□□□□ -0.12
CDH20Q9HBT6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AC004967.1-201ENST00000453589 447 ntBASIC14.29□□□□□ -0.12
CDH20Q9HBT6 POU5F1P6-201ENST00000466990 990 ntBASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH20Q9HBT6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ADH5P3-201ENST00000433842 1137 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 AL592309.1-201ENST00000443127 649 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 AC079140.1-201ENST00000508039 487 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 KRT8P48-201ENST00000515599 1220 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 SNHG9-202ENST00000564014 471 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms