Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AC232323.1-201ENST00000540724 2099 ntBASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 REXO1L5P-201ENST00000622260 2098 ntBASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 KRT8P39-201ENST00000396270 1433 ntBASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMIM11BQ8TCY0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 GPAA1P2-202ENST00000606848 1787 ntBASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SMIM11BQ8TCY0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms