Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 AC104109.2-201ENST00000602919 1418 ntBASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.61■□□□□ 0.25
CFAP61Q8NHU2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 AC009947.1-201ENST00000444350 727 ntBASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.6■□□□□ 0.25
CFAP61Q8NHU2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 TUBB7P-202ENST00000428444 1305 ntBASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFAP61Q8NHU2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 AC007326.2-201ENST00000624224 7579 ntBASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CFAP61Q8NHU2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 CRYGEP-201ENST00000412192 528 ntBASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 Z83851.2-201ENST00000609564 659 ntBASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CFAP61Q8NHU2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms