Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 CLK3P2-201ENST00000427566 1453 ntBASIC17.56■□□□□ 0.4
HERC6Q8IVU3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 AC104596.2-201ENST00000512793 793 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 RN7SL219P-201ENST00000582872 296 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 AC074044.1-201ENST00000609673 707 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 MIR6787-201ENST00000616675 61 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 GPR182-203ENST00000622922 591 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 LINC02012-201ENST00000608206 1725 ntBASIC17.55■□□□□ 0.4
HERC6Q8IVU3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERC6Q8IVU3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AL139010.1-201ENST00000454878 894 ntBASIC17.54■□□□□ 0.4
HERC6Q8IVU3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERC6Q8IVU3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.54■□□□□ 0.4
HERC6Q8IVU3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms