Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.31■□□□□ 0.36
SRLQ86TD4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.31■□□□□ 0.36
SRLQ86TD4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.31■□□□□ 0.36
SRLQ86TD4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SRLQ86TD4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.31■□□□□ 0.36
SRLQ86TD4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRLQ86TD4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 AC139749.1-202ENST00000617529 3139 ntBASIC17.31■□□□□ 0.36
SRLQ86TD4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SRLQ86TD4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRLQ86TD4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRLQ86TD4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 AC005089.1-201ENST00000619486 2241 ntBASIC17.31■□□□□ 0.36
SRLQ86TD4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRLQ86TD4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.31■□□□□ 0.36
SRLQ86TD4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRLQ86TD4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.3■□□□□ 0.36
SRLQ86TD4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.3■□□□□ 0.36
SRLQ86TD4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.3■□□□□ 0.36
SRLQ86TD4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRLQ86TD4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRLQ86TD4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SRLQ86TD4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRLQ86TD4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.29■□□□□ 0.36
SRLQ86TD4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SRLQ86TD4 AC087163.2-201ENST00000457299 853 ntBASIC17.29■□□□□ 0.36
SRLQ86TD4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.29■□□□□ 0.36
SRLQ86TD4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.29■□□□□ 0.36
SRLQ86TD4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRLQ86TD4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 FRMD8P1-201ENST00000440433 1524 ntBASIC17.29■□□□□ 0.36
SRLQ86TD4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRLQ86TD4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SRLQ86TD4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRLQ86TD4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRLQ86TD4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.28■□□□□ 0.36
SRLQ86TD4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRLQ86TD4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SRLQ86TD4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRLQ86TD4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
SRLQ86TD4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRLQ86TD4 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.28■□□□□ 0.36
SRLQ86TD4 CRYGEP-201ENST00000412192 528 ntBASIC17.28■□□□□ 0.36
SRLQ86TD4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.28■□□□□ 0.36
SRLQ86TD4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms