Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 KRT18P58-201ENST00000527480 1120 ntBASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 AC068137.2-201ENST00000605408 478 ntBASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 REXO1L8P-201ENST00000604378 1897 ntBASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
NHLRC1Q6VVB1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 AC023274.1-201ENST00000418278 595 ntBASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 MCCD1P2-201ENST00000423228 335 ntBASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 AC093724.1-201ENST00000448659 1027 ntBASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NHLRC1Q6VVB1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AL596087.1-201ENST00000400979 1969 ntBASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AL592424.1-201ENST00000563624 1536 ntBASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms