Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ACTBP60709 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ACTBP60709 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.08□□□□□ -0.16
ACTBP60709 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 POM121L3P-201ENST00000419331 1163 ntBASIC14.08□□□□□ -0.16
ACTBP60709 HCG4P8-203ENST00000443049 980 ntBASIC14.08□□□□□ -0.16
ACTBP60709 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.08□□□□□ -0.16
ACTBP60709 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.08□□□□□ -0.16
ACTBP60709 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.08□□□□□ -0.16
ACTBP60709 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.08□□□□□ -0.16
ACTBP60709 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
ACTBP60709 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.08□□□□□ -0.16
ACTBP60709 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 AC114341.1-201ENST00000618070 349 ntBASIC14.08□□□□□ -0.16
ACTBP60709 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 PMPCAP1-201ENST00000508114 1576 ntBASIC14.08□□□□□ -0.16
ACTBP60709 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 AC148477.5-201ENST00000625164 1645 ntBASIC14.08□□□□□ -0.16
ACTBP60709 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ACTBP60709 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.07□□□□□ -0.16
ACTBP60709 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 RCN1P2-201ENST00000398357 915 ntBASIC14.07□□□□□ -0.16
ACTBP60709 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.07□□□□□ -0.16
ACTBP60709 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.07□□□□□ -0.16
ACTBP60709 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.07□□□□□ -0.16
ACTBP60709 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 SSR4P1-203ENST00000599569 2260 ntBASIC14.07□□□□□ -0.16
ACTBP60709 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.07□□□□□ -0.16
ACTBP60709 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ACTBP60709 TMBIM7P-203ENST00000641617 1718 ntBASIC14.07□□□□□ -0.16
ACTBP60709 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.07□□□□□ -0.16
ACTBP60709 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 INTS4P1-201ENST00000438455 1935 ntBASIC14.06□□□□□ -0.16
ACTBP60709 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ACTBP60709 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 NUS1P2-201ENST00000417358 873 ntBASIC14.06□□□□□ -0.16
ACTBP60709 LINC00982-205ENST00000420957 435 ntBASIC14.06□□□□□ -0.16
ACTBP60709 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.06□□□□□ -0.16
ACTBP60709 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.06□□□□□ -0.16
ACTBP60709 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.06□□□□□ -0.16
ACTBP60709 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms