Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FNTAP49354 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
FNTAP49354 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.97■□□□□ 0.31
FNTAP49354 SAPCD2P3-201ENST00000455031 850 ntBASIC16.97■□□□□ 0.31
FNTAP49354 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.97■□□□□ 0.31
FNTAP49354 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 IGHV3-65-201ENST00000523210 341 ntBASIC16.97■□□□□ 0.31
FNTAP49354 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.97■□□□□ 0.31
FNTAP49354 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.97■□□□□ 0.31
FNTAP49354 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNTAP49354 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.97■□□□□ 0.31
FNTAP49354 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.97■□□□□ 0.31
FNTAP49354 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.97■□□□□ 0.31
FNTAP49354 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 AKR1C7P-201ENST00000305623 895 ntBASIC16.96■□□□□ 0.31
FNTAP49354 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
FNTAP49354 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.96■□□□□ 0.31
FNTAP49354 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 AC091304.2-201ENST00000564639 760 ntBASIC16.96■□□□□ 0.31
FNTAP49354 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
FNTAP49354 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.96■□□□□ 0.31
FNTAP49354 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.96■□□□□ 0.31
FNTAP49354 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
FNTAP49354 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNTAP49354 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
FNTAP49354 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FNTAP49354 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FNTAP49354 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FNTAP49354 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.96■□□□□ 0.3
FNTAP49354 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.95■□□□□ 0.3
FNTAP49354 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 PPT1-215ENST00000641471 2368 ntBASIC16.95■□□□□ 0.3
FNTAP49354 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
FNTAP49354 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FNTAP49354 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FNTAP49354 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
FNTAP49354 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.95■□□□□ 0.3
FNTAP49354 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FNTAP49354 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.95■□□□□ 0.3
FNTAP49354 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.95■□□□□ 0.3
FNTAP49354 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.95■□□□□ 0.3
FNTAP49354 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FNTAP49354 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.95■□□□□ 0.3
FNTAP49354 MIR3909-201ENST00000579518 119 ntBASIC16.95■□□□□ 0.3
FNTAP49354 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
FNTAP49354 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FNTAP49354 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms