Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.27■□□□□ 0.68
TNNI2P48788 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNNI2P48788 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
TNNI2P48788 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TNNI2P48788 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.27■□□□□ 0.68
TNNI2P48788 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.27■□□□□ 0.68
TNNI2P48788 AL365330.1-201ENST00000607459 531 ntBASIC19.27■□□□□ 0.68
TNNI2P48788 AC074044.1-201ENST00000609673 707 ntBASIC19.27■□□□□ 0.68
TNNI2P48788 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNNI2P48788 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNNI2P48788 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNNI2P48788 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNNI2P48788 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNNI2P48788 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNNI2P48788 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TNNI2P48788 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TNNI2P48788 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TNNI2P48788 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 AC092337.1-201ENST00000568699 1129 ntBASIC19.26■□□□□ 0.67
TNNI2P48788 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.26■□□□□ 0.67
TNNI2P48788 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
TNNI2P48788 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.26■□□□□ 0.67
TNNI2P48788 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TNNI2P48788 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI2P48788 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 AC022211.2-201ENST00000585075 2527 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 PCGF3-213ENST00000620529 1899 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 AC006538.1-201ENST00000567905 1585 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI2P48788 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNNI2P48788 FO393414.2-201ENST00000405153 598 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.25■□□□□ 0.67
TNNI2P48788 RPS2P32-201ENST00000439199 892 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.25■□□□□ 0.67
TNNI2P48788 AL589987.1-201ENST00000453380 819 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.25■□□□□ 0.67
TNNI2P48788 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.25■□□□□ 0.67
TNNI2P48788 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 CTBP2P3-201ENST00000585629 1255 ntBASIC19.25■□□□□ 0.67
TNNI2P48788 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TNNI2P48788 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI2P48788 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI2P48788 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI2P48788 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TNNI2P48788 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNNI2P48788 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TNNI2P48788 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.24■□□□□ 0.67
TNNI2P48788 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI2P48788 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms