Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC104109.2-201ENST00000602919 1418 ntBASIC16.34■□□□□ 0.21
CBX6O95503 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX6O95503 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 CDC14C-201ENST00000428251 1719 ntBASIC16.33■□□□□ 0.21
CBX6O95503 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX6O95503 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.33■□□□□ 0.21
CBX6O95503 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX6O95503 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX6O95503 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBX6O95503 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBX6O95503 LINC02447-202ENST00000501888 2146 ntBASIC16.33■□□□□ 0.21
CBX6O95503 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.33■□□□□ 0.2
CBX6O95503 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX6O95503 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CBX6O95503 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX6O95503 UPF3AP3-201ENST00000420996 769 ntBASIC16.33■□□□□ 0.2
CBX6O95503 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX6O95503 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX6O95503 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX6O95503 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.33■□□□□ 0.2
CBX6O95503 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CBX6O95503 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CBX6O95503 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX6O95503 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.33■□□□□ 0.2
CBX6O95503 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX6O95503 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX6O95503 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX6O95503 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CBX6O95503 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CBX6O95503 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.32■□□□□ 0.2
CBX6O95503 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 HMGN1P19-201ENST00000436976 333 ntBASIC16.32■□□□□ 0.2
CBX6O95503 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.32■□□□□ 0.2
CBX6O95503 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CBX6O95503 AC009533.2-201ENST00000543664 586 ntBASIC16.32■□□□□ 0.2
CBX6O95503 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 AL356488.2-201ENST00000602755 427 ntBASIC16.32■□□□□ 0.2
CBX6O95503 AL139424.1-201ENST00000607572 797 ntBASIC16.32■□□□□ 0.2
CBX6O95503 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBX6O95503 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CBX6O95503 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 AC002310.6-201ENST00000624451 1377 ntBASIC16.32■□□□□ 0.2
CBX6O95503 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CBX6O95503 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX6O95503 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX6O95503 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX6O95503 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX6O95503 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX6O95503 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.31■□□□□ 0.2
CBX6O95503 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms