Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDCP1Q9H5V8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.28■□□□□ 0.04
CDCP1Q9H5V8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
CDCP1Q9H5V8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDCP1Q9H5V8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.28■□□□□ 0.04
CDCP1Q9H5V8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 TUBB3P1-201ENST00000405796 1332 ntBASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 SPDYE14P-201ENST00000442619 822 ntBASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.27■□□□□ 0.04
CDCP1Q9H5V8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDCP1Q9H5V8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 AL512652.2-201ENST00000625156 1716 ntBASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SPDYE7P-202ENST00000420373 878 ntBASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 AC008677.1-201ENST00000519230 1561 ntBASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.26■□□□□ 0.03
CDCP1Q9H5V8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AL603756.1-201ENST00000606511 2163 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AC023824.1-201ENST00000562945 2975 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms