Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 HMGA1P5-201ENST00000412453 271 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC233702.5-201ENST00000584107 538 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC125634.1-201ENST00000438758 1403 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMIM11BQ8TCY0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ACTG1P4-201ENST00000425123 1122 ntBASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 ECEL1P3-201ENST00000427961 737 ntBASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMIM11BQ8TCY0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms