Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 UNC93B6-202ENST00000528242 690 ntBASIC16.18■□□□□ 0.18
SNX31Q8N9S9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 ACTL9-202ENST00000612068 1252 ntBASIC16.18■□□□□ 0.18
SNX31Q8N9S9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX31Q8N9S9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 GGT4P-201ENST00000623672 1708 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 FAM185BP-201ENST00000443595 716 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 AC009947.1-201ENST00000444350 727 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 AL513480.1-201ENST00000451731 511 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 RNA5SP419-201ENST00000515908 135 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.17■□□□□ 0.18
SNX31Q8N9S9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SNX31Q8N9S9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 VN2R19P-201ENST00000442399 1052 ntBASIC16.16■□□□□ 0.18
SNX31Q8N9S9 AC079776.4-201ENST00000511039 504 ntBASIC16.16■□□□□ 0.18
SNX31Q8N9S9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 HLA-A-201ENST00000376802 1334 ntBASIC16.16■□□□□ 0.18
SNX31Q8N9S9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.16■□□□□ 0.18
SNX31Q8N9S9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms