Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 AC083964.2-201ENST00000623988 2396 ntBASIC12.29□□□□□ -0.44
HIST1H2BCP62807 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 AC006277.1-201ENST00000624348 1610 ntBASIC12.29□□□□□ -0.44
HIST1H2BCP62807 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H2BCP62807 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AC010240.3-201ENST00000607688 395 ntBASIC12.28□□□□□ -0.44
HIST1H2BCP62807 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AC011474.4-201ENST00000623523 2076 ntBASIC12.28□□□□□ -0.44
HIST1H2BCP62807 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H2BCP62807 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.27□□□□□ -0.44
HIST1H2BCP62807 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 AL031731.1-201ENST00000642131 2094 ntBASIC12.27□□□□□ -0.45
HIST1H2BCP62807 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HIST1H2BCP62807 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms