Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 KRT8P12-202ENST00000472924 1397 ntBASIC17.21■□□□□ 0.35
LHX1P48742 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LHX1P48742 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LHX1P48742 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 AL080243.2-201ENST00000418783 582 ntBASIC17.21■□□□□ 0.35
LHX1P48742 TSSK5P-201ENST00000423978 907 ntBASIC17.21■□□□□ 0.35
LHX1P48742 AC004890.2-204ENST00000481968 304 ntBASIC17.21■□□□□ 0.35
LHX1P48742 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX1P48742 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.21■□□□□ 0.35
LHX1P48742 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.21■□□□□ 0.35
LHX1P48742 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.21■□□□□ 0.35
LHX1P48742 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX1P48742 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX1P48742 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX1P48742 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
LHX1P48742 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.21■□□□□ 0.34
LHX1P48742 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LHX1P48742 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
LHX1P48742 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX1P48742 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX1P48742 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX1P48742 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX1P48742 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX1P48742 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LHX1P48742 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX1P48742 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LHX1P48742 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 AC006449.6-201ENST00000612330 2296 ntBASIC17.19■□□□□ 0.34
LHX1P48742 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX1P48742 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX1P48742 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LHX1P48742 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX1P48742 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX1P48742 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX1P48742 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.19■□□□□ 0.34
LHX1P48742 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX1P48742 SERBP1P3-201ENST00000459980 809 ntBASIC17.19■□□□□ 0.34
LHX1P48742 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.19■□□□□ 0.34
LHX1P48742 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX1P48742 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX1P48742 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 AL691432.1-201ENST00000596308 1422 ntBASIC17.19■□□□□ 0.34
LHX1P48742 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LHX1P48742 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX1P48742 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LHX1P48742 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX1P48742 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms