Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FAM86EP-206ENST00000510506 987 ntBASIC13.51□□□□□ -0.25
SNCAP37840 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 AC074051.2-201ENST00000565115 352 ntBASIC13.51□□□□□ -0.25
SNCAP37840 AP002414.4-201ENST00000589764 1148 ntBASIC13.51□□□□□ -0.25
SNCAP37840 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 BNIP3P18-201ENST00000593976 575 ntBASIC13.51□□□□□ -0.25
SNCAP37840 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 CICP4-201ENST00000447359 2812 ntBASIC13.51□□□□□ -0.25
SNCAP37840 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNCAP37840 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
SNCAP37840 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 AC023908.3-201ENST00000564211 3047 ntBASIC13.5□□□□□ -0.25
SNCAP37840 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 PCED1CP-201ENST00000419887 785 ntBASIC13.5□□□□□ -0.25
SNCAP37840 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.5□□□□□ -0.25
SNCAP37840 KRT18P21-201ENST00000515767 1272 ntBASIC13.5□□□□□ -0.25
SNCAP37840 TPSP2-201ENST00000561760 610 ntBASIC13.5□□□□□ -0.25
SNCAP37840 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.5□□□□□ -0.25
SNCAP37840 AC087388.1-201ENST00000571370 1112 ntBASIC13.5□□□□□ -0.25
SNCAP37840 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 AC116407.4-201ENST00000623319 1061 ntBASIC13.5□□□□□ -0.25
SNCAP37840 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.5□□□□□ -0.25
SNCAP37840 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.5□□□□□ -0.25
SNCAP37840 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNCAP37840 AC148477.5-201ENST00000625164 1645 ntBASIC13.5□□□□□ -0.25
SNCAP37840 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCAP37840 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNCAP37840 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 AC026748.1-201ENST00000624349 3251 ntBASIC13.49□□□□□ -0.25
SNCAP37840 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCAP37840 IER3-202ENST00000376377 1350 ntBASIC13.49□□□□□ -0.25
SNCAP37840 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCAP37840 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SNCAP37840 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms