Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 AL512638.1-201ENST00000457493 794 ntBASIC14.79□□□□□ -0.04
GDF1P27539 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 POU5F1P6-201ENST00000466990 990 ntBASIC14.79□□□□□ -0.04
GDF1P27539 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 INGX-202ENST00000489074 768 ntBASIC14.79□□□□□ -0.04
GDF1P27539 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 AC092364.2-202ENST00000597012 1073 ntBASIC14.79□□□□□ -0.04
GDF1P27539 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.79□□□□□ -0.04
GDF1P27539 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.79□□□□□ -0.04
GDF1P27539 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GDF1P27539 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
GDF1P27539 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.78□□□□□ -0.04
GDF1P27539 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.78□□□□□ -0.04
GDF1P27539 FAM8A3P-201ENST00000427218 844 ntBASIC14.78□□□□□ -0.04
GDF1P27539 BCRP1-201ENST00000444246 691 ntBASIC14.78□□□□□ -0.04
GDF1P27539 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.78□□□□□ -0.04
GDF1P27539 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 AC097493.3-201ENST00000509725 367 ntBASIC14.78□□□□□ -0.04
GDF1P27539 AC027369.6-201ENST00000525520 931 ntBASIC14.78□□□□□ -0.04
GDF1P27539 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.78□□□□□ -0.04
GDF1P27539 AC105021.1-202ENST00000570572 669 ntBASIC14.78□□□□□ -0.04
GDF1P27539 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 AL096865.1-201ENST00000606796 927 ntBASIC14.78□□□□□ -0.04
GDF1P27539 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.78□□□□□ -0.04
GDF1P27539 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GDF1P27539 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
GDF1P27539 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDF1P27539 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
GDF1P27539 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
GDF1P27539 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.77□□□□□ -0.04
GDF1P27539 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
GDF1P27539 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDF1P27539 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.04
GDF1P27539 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GDF1P27539 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.77□□□□□ -0.05
GDF1P27539 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.77□□□□□ -0.05
GDF1P27539 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GDF1P27539 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms