Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 KRT8P49-201ENST00000604166 1432 ntBASIC14.9□□□□□ -0.02
CD53P19397 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 GGT3P-204ENST00000453783 1664 ntBASIC14.9□□□□□ -0.02
CD53P19397 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 AC006277.1-201ENST00000624348 1610 ntBASIC14.89□□□□□ -0.03
CD53P19397 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 AP002414.1-201ENST00000391405 1147 ntBASIC14.89□□□□□ -0.03
CD53P19397 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 MRPL20P1-201ENST00000400819 433 ntBASIC14.89□□□□□ -0.03
CD53P19397 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD53P19397 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 AC010507.1-201ENST00000633895 436 ntBASIC14.89□□□□□ -0.03
CD53P19397 AL805961.1-202ENST00000641562 540 ntBASIC14.89□□□□□ -0.03
CD53P19397 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 PAUPAR-201ENST00000630360 2965 ntBASIC14.89□□□□□ -0.03
CD53P19397 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.89□□□□□ -0.03
CD53P19397 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.89□□□□□ -0.03
CD53P19397 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD53P19397 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD53P19397 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.89□□□□□ -0.03
CD53P19397 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD53P19397 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CD53P19397 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CD53P19397 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CD53P19397 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.88□□□□□ -0.03
CD53P19397 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.88□□□□□ -0.03
CD53P19397 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.88□□□□□ -0.03
CD53P19397 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.88□□□□□ -0.03
CD53P19397 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD53P19397 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.88□□□□□ -0.03
CD53P19397 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.88□□□□□ -0.03
CD53P19397 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.88□□□□□ -0.03
CD53P19397 AC096734.2-201ENST00000562054 433 ntBASIC14.88□□□□□ -0.03
CD53P19397 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.88□□□□□ -0.03
CD53P19397 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms