Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 AL627223.1-201ENST00000416693 442 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.63■□□□□ 0.09
PCDH17O14917 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.63■□□□□ 0.09
PCDH17O14917 HLA-J-203ENST00000494367 1087 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH17O14917 AC079140.1-201ENST00000508039 487 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.63■□□□□ 0.09
PCDH17O14917 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH17O14917 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 AC084121.4-201ENST00000641598 221 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 AF228730.8-201ENST00000642140 221 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 LINC00895-201ENST00000629028 1637 ntBASIC15.63■□□□□ 0.09
PCDH17O14917 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH17O14917 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH17O14917 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PCDH17O14917 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH17O14917 AL592309.1-201ENST00000443127 649 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH17O14917 IGHV3-62-201ENST00000520057 340 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH17O14917 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 AC015911.4-201ENST00000588022 1070 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 AC027612.4-201ENST00000605371 583 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH17O14917 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PCDH17O14917 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 LINC00554-201ENST00000564841 3011 ntBASIC15.62■□□□□ 0.09
PCDH17O14917 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH17O14917 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH17O14917 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDH17O14917 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH17O14917 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDH17O14917 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH17O14917 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH17O14917 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH17O14917 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH17O14917 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
PCDH17O14917 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms