Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 LINC00895-201ENST00000629028 1637 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLCA1A8K7I4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 AC002310.6-201ENST00000624451 1377 ntBASIC15.33■□□□□ 0.04
CLCA1A8K7I4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLCA1A8K7I4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 RPS8P6-201ENST00000426177 609 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 PAWRP1-201ENST00000451083 565 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AP001160.2-201ENST00000596071 487 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC010507.1-201ENST00000633895 436 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC010491.1-201ENST00000563101 2797 ntBASIC15.32■□□□□ 0.04
CLCA1A8K7I4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms