Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML2Q9UQR0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCML2Q9UQR0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCML2Q9UQR0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML2Q9UQR0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML2Q9UQR0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.9■□□□□ 0.3
SCML2Q9UQR0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 UGT1A2P-201ENST00000454886 866 ntBASIC16.9■□□□□ 0.3
SCML2Q9UQR0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 MIR3197-201ENST00000582241 73 ntBASIC16.9■□□□□ 0.3
SCML2Q9UQR0 AL844908.2-201ENST00000609461 460 ntBASIC16.9■□□□□ 0.3
SCML2Q9UQR0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.9■□□□□ 0.3
SCML2Q9UQR0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML2Q9UQR0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCML2Q9UQR0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.89■□□□□ 0.3
SCML2Q9UQR0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCML2Q9UQR0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SCML2Q9UQR0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCML2Q9UQR0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 AC004987.2-201ENST00000395959 1148 ntBASIC16.89■□□□□ 0.29
SCML2Q9UQR0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 MRPS18AP1-201ENST00000414458 589 ntBASIC16.89■□□□□ 0.29
SCML2Q9UQR0 AC009477.1-201ENST00000452936 217 ntBASIC16.89■□□□□ 0.29
SCML2Q9UQR0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 AC022144.1-201ENST00000602255 1580 ntBASIC16.89■□□□□ 0.29
SCML2Q9UQR0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML2Q9UQR0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 TSPY16P-201ENST00000449843 468 ntBASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 SERBP1P3-201ENST00000459980 809 ntBASIC16.88■□□□□ 0.29
SCML2Q9UQR0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AC243562.2-201ENST00000561247 970 ntBASIC16.88■□□□□ 0.29
SCML2Q9UQR0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms