Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRFN1Q9P244 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
LRFN1Q9P244 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRFN1Q9P244 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRFN1Q9P244 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 TNRC18P3-201ENST00000441896 2691 ntBASIC14.99□□□□□ -0.01
LRFN1Q9P244 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRFN1Q9P244 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 AC002472.2-201ENST00000442739 958 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 COX20P2-201ENST00000452636 358 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 AC004890.2-204ENST00000481968 304 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 TERF1P3-201ENST00000505638 1227 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 RN7SL204P-201ENST00000582831 262 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 AC239800.4-201ENST00000603712 296 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 AC124067.4-201ENST00000519691 2379 ntBASIC14.98□□□□□ -0.01
LRFN1Q9P244 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
LRFN1Q9P244 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRFN1Q9P244 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRFN1Q9P244 FAM207CP-201ENST00000443486 507 ntBASIC14.97□□□□□ -0.01
LRFN1Q9P244 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRFN1Q9P244 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms