Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCG3Q8WXD2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCG3Q8WXD2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SCG3Q8WXD2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SCG3Q8WXD2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SCG3Q8WXD2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 IGLL3P-201ENST00000412472 434 ntBASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 RHOQP3-201ENST00000437982 621 ntBASIC16.82■□□□□ 0.28
SCG3Q8WXD2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AC074386.1-202ENST00000463561 864 ntBASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CXCL1P1-201ENST00000502804 216 ntBASIC16.82■□□□□ 0.28
SCG3Q8WXD2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AL596442.2-201ENST00000610240 980 ntBASIC16.82■□□□□ 0.28
SCG3Q8WXD2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCG3Q8WXD2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 AC254562.1-201ENST00000417586 456 ntBASIC16.81■□□□□ 0.28
SCG3Q8WXD2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 PMS2P2-201ENST00000425039 1128 ntBASIC16.81■□□□□ 0.28
SCG3Q8WXD2 ACTG1P14-201ENST00000446382 1122 ntBASIC16.81■□□□□ 0.28
SCG3Q8WXD2 CEND1P1-201ENST00000451006 455 ntBASIC16.81■□□□□ 0.28
SCG3Q8WXD2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 KRT19P2-202ENST00000557173 1012 ntBASIC16.81■□□□□ 0.28
SCG3Q8WXD2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCG3Q8WXD2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 AC129492.6-201ENST00000611383 1305 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms