Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 NUP210P1-202ENST00000504322 710 ntBASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 COX5BP1-201ENST00000507622 393 ntBASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 AC126915.1-201ENST00000522847 1038 ntBASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRUNE2Q8WUY3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 AC011491.1-203ENST00000637688 543 ntBASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 GGT4P-201ENST00000623672 1708 ntBASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 AC007613.1-201ENST00000572811 2597 ntBASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 AC139713.2-201ENST00000641328 2723 ntBASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRUNE2Q8WUY3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AC134915.1-201ENST00000426461 574 ntBASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AP001063.1-201ENST00000568332 529 ntBASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 RPL13AP25-201ENST00000484130 612 ntBASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRUNE2Q8WUY3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 CEP164P1-201ENST00000455142 418 ntBASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PRUNE2Q8WUY3 AL645728.1-201ENST00000366221 2101 ntBASIC16.7■□□□□ 0.26
PRUNE2Q8WUY3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRUNE2Q8WUY3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRUNE2Q8WUY3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.7■□□□□ 0.26
PRUNE2Q8WUY3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRUNE2Q8WUY3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms