Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP1Q8TDR0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP1Q8TDR0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP1Q8TDR0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 RHOQP3-201ENST00000437982 621 ntBASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 AC064836.3-201ENST00000607928 673 ntBASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP1Q8TDR0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 BCAR1-209ENST00000546196 1340 ntBASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 AC145285.3-201ENST00000564603 959 ntBASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP1Q8TDR0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms