Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.42■□□□□ 0.06
RPS3AP61247 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS3AP61247 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS3AP61247 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.42■□□□□ 0.06
RPS3AP61247 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.42■□□□□ 0.06
RPS3AP61247 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS3AP61247 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
RPS3AP61247 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RPS3AP61247 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 MED15P5-201ENST00000423150 992 ntBASIC15.41■□□□□ 0.06
RPS3AP61247 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 AP000347.1-202ENST00000435868 847 ntBASIC15.41■□□□□ 0.06
RPS3AP61247 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 AC108073.2-201ENST00000464002 357 ntBASIC15.41■□□□□ 0.06
RPS3AP61247 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.41■□□□□ 0.06
RPS3AP61247 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 AC034105.1-201ENST00000563488 319 ntBASIC15.41■□□□□ 0.06
RPS3AP61247 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 TERC-201ENST00000602385 541 ntBASIC15.41■□□□□ 0.06
RPS3AP61247 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RPS3AP61247 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.41■□□□□ 0.06
RPS3AP61247 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPS3AP61247 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RPS3AP61247 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
RPS3AP61247 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 AC063926.3-201ENST00000624734 5658 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RPS3AP61247 MIR574-201ENST00000385209 96 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.4■□□□□ 0.06
RPS3AP61247 PRSS29P-201ENST00000440800 595 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 RNA5SP416-201ENST00000516838 111 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.4■□□□□ 0.06
RPS3AP61247 FAM197Y3-203ENST00000618346 717 ntBASIC15.4■□□□□ 0.06
RPS3AP61247 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RPS3AP61247 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RPS3AP61247 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RPS3AP61247 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.4■□□□□ 0.06
RPS3AP61247 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPS3AP61247 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
RPS3AP61247 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms